BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F02LP1|AL425724
(804 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1207 1537 0.0
>3x_Contig1207
Length = 6451
Score = 1537 bits (773), Expect = 0.0
Identities = 797/805 (99%), Gaps = 2/805 (0%)
Strand = Plus / Plus
Query: 1 attattgcctaattctgatataamcgtaaagccgctaagaaaagccgctaaggaaagacg 60
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2546 attattgcctaattctgatataaaagtaaagccgctaagaaaagccgctaaggaaagacg 2605
Query: 61 ca-tgagacaaagatcaacatctattgtacatgataacactgcaagtwatatggctttct 119
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2606 cagtgagacaaagatcaacatctattgtacatgataacactgcaagtaatatggctttct 2665
Query: 120 acaaacatatatggctcactactttatatttatcagtactatgtagaaaagatggaagac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2666 acaaacatatatggctcactactttatatttatcagtactatgtagaaaagatggaagac 2725
Query: 180 agaacaagcaatgcactgcatgtgttacacttaaacctttcgaactcagttccggtgatg 239
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2726 agaacaagcaatgcactgcatgtgt-acacttaaacctttcgaactcagttccggtgatg 2784
Query: 240 gtcatgatggggaggaccatgatgagataatctttcttgatccaccacccaccgcaatat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2785 gtcatgatggggaggaccatgatgagataatctttcttgatccaccacccaccgcaatat 2844
Query: 300 gacatgtgactgaagagtcacgtgccatgtaaatwaacactcttcagggactgtttacca 359
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2845 gacatgtgactgaagagtcacgtgccatgtaaataaacactcttcagggactgtttacca 2904
Query: 360 ttttaatttgttttggtttgaaatttgaataaaaaaaacaaaacaccaaaacacgaaaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2905 ttttaatttgttttggtttgaaatttgaataaaaaaaacaaaacaccaaaacacgaaaaa 2964
Query: 420 ggctatataatttaattattaattacattacatgagacatcattaatcaattacgttcac 479
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2965 ggctatatagtttaattattaattacattacatgagacatcattaatcaattacgttcac 3024
Query: 480 ttttcttgggagaagcagttttctatcctagttgtgaaagggtattgtagtggttatwag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3025 ttttcttgggagaagcagttttctatcctagttgtgaaagggtattgtagtggttataag 3084
Query: 540 gtcgcttgaaccaggctaaattgactccacagaattagaaatgtcacaggtggaagaagt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3085 gtcgcttgaaccaggctaaattgactccacagaattagaaatgtcacaggtggaagaagt 3144
Query: 600 tcagactactcagggccattctcagttgatggtctcacgaaccgaagaacagatggaaga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3145 tcagactactcagggccattctcagttgatggtctcacgaaccgaagaacagatggaaga 3204
Query: 660 tgttcagcaaagaattcaggaaacggattttatggctgaagaagacgatgtggctctagc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3205 tgttcagcaaagaattcaggaaacggattttatggctgaagaagacgatgtggctctagc 3264
Query: 720 cgcctttgtcccaatagagaaattgcaggtgaacggtatcacttctggtgatatcaagaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3265 cgcctttgtcccaatagagaaattgcaggtgaacggtatcacttctggtgatatcaagaa 3324
Query: 780 actaagagaaagtgggttacacaca 804
|||||||||||||||||||||||||
Sbjct: 3325 actaagagaaagtgggttacacaca 3349
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6728
Number of Sequences: 1807
Number of extensions: 6728
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 804
length of database: 10,358,551
effective HSP length: 16
effective length of query: 788
effective length of database: 10,329,639
effective search space: 8139755532
effective search space used: 8139755532
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)